Program

  • 14:00–15:00
    Alex Graudenzi

    From evolution models to evolutionary signatures of human cancers

  • 15:00–16:00
    Shilpa Garg

    Towards routine chromosome-scale haplotype-resolved reconstruction in cancer genomics

  • 16:00–17:00
    Massimiliano Rossi

    On DRAGEN multigenome mapper and pangenome reference: the quest for accuracy gains in the dark regions of the genome

  • 9:00–10:00
    Chirag Jain

    Pangenome-based genome inference via integer programming

  • 10:00–11:00
    Xian Chang

    Short and long read pangenome mapping with vg giraffe

  • 11:00–12:00
    Davide Bolognini

    Pangenome-based inference of complex haplotypes from sequencing

  • 12:00–14:00
    Lunch break

  • 14:00–15:00
    Luca Denti

    Pangenome graph augmentation from unassembled long reads

  • 15:00–16:00
    Lauren Mak

    The Microbiome-in-a-Bottle Project: From Metagenomes to Pangenomes

  • 16:00–17:00
    Murray Patterson

    Characterizing viral subtypes from genomic big data

  • 9:00–10:00
    Simone Rubinacci

    Identity-by-Descent and phasing methods for Genome-Wide Association Studies

  • 10:00–11:00
    Anna Paola Carrieri

    Biomedical Foundation Models for genomics

  • 11:00–12:00
    Davide Cozzi

    Indexing pangenomic haplotype data using the Positional BWT

  • 12:00–13:00
    Simone Ciccolella

    Modelling and combinatorial approaches for Pangenomics